- Predicted Gene MLOC_80073
MLOC_80073 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 5.16867 | 3.57916 | 4.0163 | 4.07496 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 2.63186 | 3.2653 | 2.10991 | 2.17132 |
| INF1 | Young developing inflorescences (5mm) | 11.7218 | 14.4056 | 13.0857 | 11.9323 |
| INF2 | Developing inflorescences (1-1.5 cm) | 7.16055 | 8.54571 | 6.90067 | 9.12209 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 7.24169 | 5.22414 | 5.12769 | 6.07928 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 0.0679149 | 0.128631 | 1.9537 | 1.61559 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 2.06765 | 2.57212 | 2.76212 | 2.60705 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 3.50863 | 3.6918 | 4.19873 | 9.76547 |
CDS Structure of MLOC_80073
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_80073.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os04g10460.1 |
-2 |
0.0 |
647 |
371/485 (76%) |
13104.m00941 protein amidase, putative, expressed |
| TAIR PP10 |
AT4G34880.1 |
-2 |
2e-127 |
387 |
248/484 (51%) |
Amidase family protein | chr4:16615549-16617424 FORWARD LENGTH=466 |
