- Predicted Gene MLOC_80060
MLOC_80060 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 2.0558 | 1.92972 | 1.28934 | 1.83827 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 0.274331 | 0 | 0.450671 | 0.290998 |
| INF1 | Young developing inflorescences (5mm) | 3.56201 | 3.4467 | 4.05051 | 3.47766 |
| INF2 | Developing inflorescences (1-1.5 cm) | 2.36446 | 2.86992 | 2.33537 | 3.08903 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 0.428671 | 0.512517 | 0.345131 | 0.555806 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 0 | 0.0289182 | 0 | 0.185795 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 0.308904 | 0.168178 | 0.205573 | 0.239425 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 0.143441 | 0.0342716 | 0.164097 | 0.287001 |
CDS Structure of MLOC_80060
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_80060.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os02g45570.2 |
-2 |
7e-92 |
278 |
149/209 (71%) |
13102.m05113 protein growth regulating factor protein, putative, expressed |
| TAIR PP10 |
AT3G52910.1 |
-2 |
7e-35 |
133 |
72/145 (50%) |
| Symbols: AtGRF4, GRF4 | growth-regulating factor 4 | chr3:19616177-19618268 REVERSE LENGTH=380 |