- Predicted Gene MLOC_79988
MLOC_79988 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 268.86 | 260.712 | 260.998 | 296.585 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 57.9277 | 42.4816 | 45.7861 | 46.0292 |
| INF1 | Young developing inflorescences (5mm) | 70.8237 | 69.1818 | 61.6322 | 62.5085 |
| INF2 | Developing inflorescences (1-1.5 cm) | 42.347 | 47.3712 | 38.7932 | 51.765 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 100.037 | 129.506 | 108.625 | 174.302 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 40.7216 | 45.9562 | 47.8874 | 170.652 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 71.239 | 71.7153 | 72.3592 | 76.9971 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 16.0834 | 13.9014 | 15.5758 | 38.842 |
CDS Structure of MLOC_79988
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_79988.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os07g27790.1 |
-3 |
0.0 |
857 |
405/447 (91%) |
13107.m02778 protein glutamate--cysteine ligase, chloroplast precursor, putative, expressed |
| TAIR PP10 |
AT4G23100.3 |
-3 |
0.0 |
781 |
366/447 (82%) |
| Symbols: GSH1 | glutamate-cysteine ligase | chr4:12103458-12106751 REVERSE LENGTH=522 |