- Predicted Gene MLOC_79979
MLOC_79979 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_79979_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 7.22031 | 7.53182 | 7.44255 | 9.02027 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 5.51125 | 6.48127 | 6.16401 | 5.96846 |
INF1 | Young developing inflorescences (5mm) | 16.3178 | 17.542 | 21.2896 | 17.4934 |
INF2 | Developing inflorescences (1-1.5 cm) | 23.8546 | 22.4402 | 23.2641 | 28.279 |
ROO | Roots from the seedlings (10 cm shoot stage) | 10.0819 | 8.40268 | 8.99091 | 13.5832 |
NOD | Developing tillers at six leaf stage, 3rd internode | 5.7639 | 9.51167 | 11.3307 | 36.4226 |
CAR5 | Developing grain, bracts removed (5 DPA) | 9.51253 | 10.1754 | 10.045 | 11.1843 |
CAR15 | Developing grain, bracts removed (15 DPA) | 6.76476 | 6.0921 | 8.1304 | 17.4267 |
CDS Structure of MLOC_79979
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_79979.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os04g39090.1 |
+3 |
3e-104 |
322 |
215/411 (52%) |
13104.m03773 protein SAM domain containing protein, putative, expressed |
TAIR PP10 |
AT1G70180.2 |
+3 |
5e-48 |
175 |
164/486 (34%) |
Sterile alpha motif (SAM) domain-containing protein | chr1:26426768-26429097 FORWARD LENGTH=460 |