MLOC_79958 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains278.248198.091220.504259.849
LEAShoots from the seedlings (10 cm shoot stage)87.519695.569197.629387.6889
INF1Young developing inflorescences (5mm)93.3645107.49194.371598.1946
INF2Developing inflorescences (1-1.5 cm)71.747370.246179.406795.2578
ROORoots from the seedlings (10 cm shoot stage)171.886206.142249.012291.67
NODDeveloping tillers at six leaf stage, 3rd internode158.89672.358843.8543222.021
CAR5Developing grain, bracts removed (5 DPA)93.7105114.264101.851125.639
CAR15Developing grain, bracts removed (15 DPA)19.334719.05219.99253.3642



CDS Structure of MLOC_79958






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_79958.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK374158NoneNoneNoneNone
MLOC_79958.1CUST_6757_PI427708080AvailableAvailablecontig_87846 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os04g24520.1 -1 2e-37 129 60/65 (92%) 13104.m02295 protein ribosomal protein L51, putative, expressed
TAIR PP10 AT5G47890.1 -1 1e-43 144 66/93 (71%) NADH-ubiquinone oxidoreductase B8 subunit, putative | chr5:19388806-19390409 FORWARD LENGTH=97