- Predicted Gene MLOC_79952
MLOC_79952 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 14.4424 | 12.449 | 11.4406 | 13.8267 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 7.78438 | 5.7414 | 5.46274 | 5.6899 |
| INF1 | Young developing inflorescences (5mm) | 13.6709 | 11.8565 | 10.3183 | 10.6977 |
| INF2 | Developing inflorescences (1-1.5 cm) | 9.06216 | 10.1739 | 11.2712 | 11.8067 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 9.07737 | 12.0057 | 12.0233 | 15.4023 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 1.27305 | 1.45537 | 3.5778 | 6.49105 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 13.4059 | 13.6918 | 16.4792 | 15.427 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 3.71582 | 2.75142 | 4.12332 | 8.38735 |
CDS Structure of MLOC_79952
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_79952.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os01g67210.1 |
-1 |
0.0 |
766 |
381/490 (78%) |
13101.m07288 protein PPR repeat domain containing protein, putative, expressed |
| TAIR PP10 |
AT3G02650.1 |
-1 |
4e-129 |
399 |
224/492 (46%) |
Tetratricopeptide repeat (TPR)-like superfamily protein | chr3:568135-569865 FORWARD LENGTH=576 |