- Predicted Gene MLOC_79902
MLOC_79902 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 1.43511 | 0.976171 | 0.669866 | 0.733717 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 2.66832 | 2.08832 | 2.07189 | 1.28888 |
| INF1 | Young developing inflorescences (5mm) | 7.01721 | 7.76146 | 9.44089 | 3.84968 |
| INF2 | Developing inflorescences (1-1.5 cm) | 8.02638 | 12.2244 | 9.90968 | 7.10291 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 0.526513 | 1.62614 | 1.54777 | 0.959609 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 0.700151 | 0.333346 | 1.23988 | 0.964363 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 3.80541 | 3.38243 | 2.20746 | 1.97396 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 0.992475 | 0.663764 | 1.20977 | 1.43071 |
CDS Structure of MLOC_79902
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_79902.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os04g49990.2 |
+2 |
2e-40 |
146 |
71/74 (96%) |
13104.m05113 protein AT hook motif domain containing protein, expressed |
| TAIR PP10 |
AT4G12080.1 |
+2 |
4e-25 |
102 |
48/72 (67%) |
| Symbols: AHL1, ATAHL1 | AT-hook motif nuclear-localized protein 1 | chr4:7239466-7241246 FORWARD LENGTH=356 |