- Predicted Gene MLOC_79887
MLOC_79887 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 9.37928 | 9.47448 | 8.38585 | 8.71946 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 8.53461 | 7.77725 | 5.96046 | 5.51613 |
| INF1 | Young developing inflorescences (5mm) | 15.4862 | 14.627 | 15.4045 | 12.9311 |
| INF2 | Developing inflorescences (1-1.5 cm) | 17.9776 | 13.9765 | 15.0744 | 16.6406 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 4.455 | 6.20012 | 9.27231 | 6.21901 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 6.50078 | 2.53796 | 6.48396 | 7.41316 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 10.4517 | 12.0173 | 10.2264 | 10.1743 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 4.15645 | 3.13956 | 3.37039 | 8.28669 |
CDS Structure of MLOC_79887
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_79887.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os12g31380.1 |
+2 |
7e-23 |
98 |
92/124 (74%) |
13112.m03194 protein initiation factor 2 subunit family domain containing protein, expressed |
| TAIR PP10 |
AT1G53900.1 |
+2 |
1e-13 |
71 |
66/111 (59%) |
Eukaryotic translation initiation factor 2B (eIF-2B) family protein | chr1:20127634-20130834 FORWARD LENGTH=580 |