- Predicted Gene MLOC_79876
MLOC_79876 FPKM values
FPKM by Treatment | FPKM by Replicate |
|
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 15.6275 | 12.7271 | 13.3081 | 12.586 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 9.1635 | 13.1302 | 22.4817 | 10.8364 |
INF1 | Young developing inflorescences (5mm) | 1.39103 | 0.833201 | 1.56324 | 1.07787 |
INF2 | Developing inflorescences (1-1.5 cm) | 0.454281 | 0.489003 | 0.834456 | 0.616887 |
ROO | Roots from the seedlings (10 cm shoot stage) | 35.7147 | 18.3874 | 20.8078 | 19.7666 |
NOD | Developing tillers at six leaf stage, 3rd internode | 6.70503 | 5.66935 | 7.26449 | 14.3305 |
CAR5 | Developing grain, bracts removed (5 DPA) | 4.64691 | 5.81661 | 4.01332 | 4.63659 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0.714732 | 0.657912 | 0.468153 | 1.59753 |
CDS Structure of MLOC_79876
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_79876.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os12g32940.1 |
-1 |
0.0 |
624 |
396/486 (81%) |
13112.m03359 protein transporter family protein, putative, expressed |
TAIR PP10 |
AT3G18830.1 |
-1 |
4e-136 |
412 |
245/481 (51%) |
| Symbols: ATPLT5, PMT5, ATPMT5 | polyol/monosaccharide transporter 5 | chr3:6489000-6491209 REVERSE LENGTH=539 |