MLOC_79872 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains11.19857.0136513.02160
LEAShoots from the seedlings (10 cm shoot stage)5.633617.7693414.41190
INF1Young developing inflorescences (5mm)12.19138.888629.086040
INF2Developing inflorescences (1-1.5 cm)11.329411.110812.58290
ROORoots from the seedlings (10 cm shoot stage)4.791878.091371.128140
NODDeveloping tillers at six leaf stage, 3rd internode4.5455213.166112.18680
CAR5Developing grain, bracts removed (5 DPA)15.899811.59588.059250
CAR15Developing grain, bracts removed (15 DPA)2.667464.796833.59120



CDS Structure of MLOC_79872






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK363025
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK363025CUST_20652_PI427708080NoneNoneNone
MLOC_25012.1NoneAvailableAvailablecontig_1666266 (Mapped)
MLOC_31875.1NoneAvailableNonecontig_223168 (Mapped)
MLOC_71117.2NoneAvailableNonecontig_59193 (Mapped)
MLOC_79872.1NoneAvailableNonecontig_873571 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----