- Predicted Gene MLOC_79856
MLOC_79856 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 11.2098 | 5.99681 | 7.77791 | 6.90465 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 5.98112 | 4.36935 | 8.73256 | 4.31588 |
| INF1 | Young developing inflorescences (5mm) | 3.72852 | 5.90669 | 4.93398 | 4.0089 |
| INF2 | Developing inflorescences (1-1.5 cm) | 3.23863 | 3.61343 | 3.35594 | 3.6148 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 16.7239 | 7.58045 | 8.61435 | 8.18678 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 2.03325 | 4.02857 | 3.85085 | 8.07172 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 7.85645 | 10.2938 | 7.46497 | 8.02123 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 3.09914 | 1.57803 | 1.70515 | 5.27853 |
CDS Structure of MLOC_79856
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_79856.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os03g02390.1 |
+3 |
3e-69 |
221 |
129/166 (78%) |
13103.m00195 protein mitochondrial import inner membrane translocase subunit Tim17, putative, expressed |
| TAIR PP10 |
AT1G17530.1 |
+3 |
6e-48 |
164 |
88/158 (56%) |
| Symbols: ATTIM23-1, TIM23-1 | translocase of inner mitochondrial membrane 23 | chr1:6027723-6028286 FORWARD LENGTH=187 |