MLOC_7985 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains4.652293.565753.976043.69229
LEAShoots from the seedlings (10 cm shoot stage)3.023840.2236970.4150570.971962
INF1Young developing inflorescences (5mm)21.319326.012124.263919.4097
INF2Developing inflorescences (1-1.5 cm)16.048820.064120.44519.3113
ROORoots from the seedlings (10 cm shoot stage)5.383924.063835.070974.18761
NODDeveloping tillers at six leaf stage, 3rd internode0.02858050.1166570.03532950.23078
CAR5Developing grain, bracts removed (5 DPA)59.88467.066365.213857.4907
CAR15Developing grain, bracts removed (15 DPA)42.643538.35439.034492.2874



CDS Structure of MLOC_7985






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_7985.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_7985.1CUST_16677_PI427708080AvailableAvailablecontig_140747 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os04g48490.1 +2 3e-175 520 276/307 (90%) 13104.m04938 protein fasciclin-like arabinogalactan protein, putative, expressed
TAIR PP10 AT3G60900.1 +2 4e-117 368 193/310 (62%) | Symbols: FLA10 | FASCICLIN-like arabinogalactan-protein 10 | chr3:22499573-22500841 REVERSE LENGTH=422