MLOC_79818 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains11.94955.71916.212576.89546
LEAShoots from the seedlings (10 cm shoot stage)5.388733.206516.123163.89646
INF1Young developing inflorescences (5mm)13.66717.705818.888412.8001
INF2Developing inflorescences (1-1.5 cm)20.525613.517616.728916.5948
ROORoots from the seedlings (10 cm shoot stage)12.71129.312857.3607210.2497
NODDeveloping tillers at six leaf stage, 3rd internode5.621238.7381215.33928.292
CAR5Developing grain, bracts removed (5 DPA)6.3118310.574510.04437.52484
CAR15Developing grain, bracts removed (15 DPA)2.683582.149622.853875.4713



CDS Structure of MLOC_79818






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_79818.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_79818.1CUST_10645_PI427708083AvailableAvailablecontig_8709 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os04g55290.3 +2 1e-32 119 49/54 (91%) 13104.m05730 protein G10 protein, putative, expressed
TAIR PP10 AT4G21110.1 +2 2e-29 110 44/54 (81%) G10 family protein | chr4:11267673-11268774 FORWARD LENGTH=145