MLOC_79770 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.1581290.148330.3132720.15265
LEAShoots from the seedlings (10 cm shoot stage)00.1110940.04493660.0675016
INF1Young developing inflorescences (5mm)00.03015540.03650550.0375479
INF2Developing inflorescences (1-1.5 cm)0.1415560.1098150.1609530.123513
ROORoots from the seedlings (10 cm shoot stage)0.05479150.12933900.163529
NODDeveloping tillers at six leaf stage, 3rd internode0.026493500.01603730.0179877
CAR5Developing grain, bracts removed (5 DPA)0.05837970.05309140.06550480.0464903
CAR15Developing grain, bracts removed (15 DPA)346.813441.752381.049699.261



CDS Structure of MLOC_79770






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_79770.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_79770.1CUST_16671_PI427708080AvailableAvailablecontig_86878 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g41419.1 -2 3e-110 355 179/254 (70%) 13103.m04459 protein serpin domain containing protein, putative, expressed
TAIR PP10 AT1G47710.1 -2 2e-80 265 138/260 (53%) Serine protease inhibitor (SERPIN) family protein | chr1:17558271-17560061 FORWARD LENGTH=391