MLOC_79759 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.2785151.173840.3667340.996041
LEAShoots from the seedlings (10 cm shoot stage)0.8395550.4330340.3820420.622637
INF1Young developing inflorescences (5mm)0.2332701.152260.46229
INF2Developing inflorescences (1-1.5 cm)00.3462360.2521770.502757
ROORoots from the seedlings (10 cm shoot stage)00.2548641.638430.70347
NODDeveloping tillers at six leaf stage, 3rd internode1.888492.253941.593728.54187
CAR5Developing grain, bracts removed (5 DPA)0.7205070.8530120.5096350.774577
CAR15Developing grain, bracts removed (15 DPA)0.235032000.436008



CDS Structure of MLOC_79759






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_79759.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_79759.1CUST_10635_PI427708083AvailableAvailablecontig_86837 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g65720.1 -2 6e-45 154 70/94 (74%) 13101.m07105 protein expressed protein
TAIR PP10 AT5G67540.1 -2 6e-30 111 51/95 (54%) Arabinanase/levansucrase/invertase | chr5:26944253-26946058 REVERSE LENGTH=466