MLOC_79745 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.04678580.3764910.06253040.182071
LEAShoots from the seedlings (10 cm shoot stage)0.2989380.15890400.1247
INF1Young developing inflorescences (5mm)0.1656620.1118280.1838230.102341
INF2Developing inflorescences (1-1.5 cm)0.1796990.1272610.2583940.153189
ROORoots from the seedlings (10 cm shoot stage)0000
NODDeveloping tillers at six leaf stage, 3rd internode00.1771290.178790.742389
CAR5Developing grain, bracts removed (5 DPA)0.2943190.7797860.4245440.358501
CAR15Developing grain, bracts removed (15 DPA)0.2190260.09307390.3568050.399111



CDS Structure of MLOC_79745






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_79745.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_79745.1NoneAvailableAvailablecontig_86745 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g55980.1 -3 8e-35 129 61/71 (86%) 13102.m06427 protein vacuolar protein sorting 55 family protein, putative, expressed
TAIR PP10 AT1G32410.5 -3 3e-26 104 49/67 (73%) Vacuolar protein sorting 55 (VPS55) family protein | chr1:11694398-11695297 FORWARD LENGTH=140