- Predicted Gene MLOC_79745
MLOC_79745 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 0.0467858 | 0.376491 | 0.0625304 | 0.182071 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 0.298938 | 0.158904 | 0 | 0.1247 |
| INF1 | Young developing inflorescences (5mm) | 0.165662 | 0.111828 | 0.183823 | 0.102341 |
| INF2 | Developing inflorescences (1-1.5 cm) | 0.179699 | 0.127261 | 0.258394 | 0.153189 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 0 | 0 | 0 | 0 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 0 | 0.177129 | 0.17879 | 0.742389 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 0.294319 | 0.779786 | 0.424544 | 0.358501 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 0.219026 | 0.0930739 | 0.356805 | 0.399111 |
CDS Structure of MLOC_79745
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_79745.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os02g55980.1 |
-3 |
8e-35 |
129 |
61/71 (86%) |
13102.m06427 protein vacuolar protein sorting 55 family protein, putative, expressed |
| TAIR PP10 |
AT1G32410.5 |
-3 |
3e-26 |
104 |
49/67 (73%) |
Vacuolar protein sorting 55 (VPS55) family protein | chr1:11694398-11695297 FORWARD LENGTH=140 |