MLOC_79744 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains7.51506e-070.044947800.0209749
LEAShoots from the seedlings (10 cm shoot stage)0.4952140.1144490.2513520.224696
INF1Young developing inflorescences (5mm)0.1461870.1754470.1153060.096964
INF2Developing inflorescences (1-1.5 cm)0.3413910.2717780.2497940.265626
ROORoots from the seedlings (10 cm shoot stage)0000
NODDeveloping tillers at six leaf stage, 3rd internode00.0206540.1367620.168202
CAR5Developing grain, bracts removed (5 DPA)0.4734780.4522480.2865980.342222
CAR15Developing grain, bracts removed (15 DPA)0.06373150.074121500.0943249



CDS Structure of MLOC_79744






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_79744.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_79744.2CUST_10633_PI427708083AvailableAvailablecontig_86745 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os04g58960.1 +2 4e-91 227 104/119 (87%) 13104.m06211 protein regulator of chromosome condensation, putative, expressed
TAIR PP10 AT5G42140.1 +2 2e-70 186 79/119 (66%) Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain | chr5:16837547-16841640 REVERSE LENGTH=1073