- Predicted Gene MLOC_79729
MLOC_79729 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 31.0063 | 21.5489 | 24.9343 | 25.749 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 23.1649 | 25.223 | 45.3081 | 27.6303 |
| INF1 | Young developing inflorescences (5mm) | 24.0855 | 30.4668 | 29.6435 | 25.8335 |
| INF2 | Developing inflorescences (1-1.5 cm) | 24.0017 | 33.3466 | 24.4978 | 33.7601 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 53.0959 | 31.8172 | 26.8456 | 41.7026 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 17.2069 | 31.4248 | 35.8732 | 108.217 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 25.5794 | 29.0931 | 22.6358 | 27.6562 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 4.57479 | 4.36844 | 4.57829 | 11.5896 |
CDS Structure of MLOC_79729
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_79729.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os03g57790.2 |
+3 |
1e-20 |
89 |
41/42 (98%) |
13103.m06340 protein ubiquitin-conjugating enzyme, putative, expressed |
| TAIR PP10 |
AT2G02760.1 |
+3 |
4e-20 |
87 |
39/42 (93%) |
| Symbols: ATUBC2, UBC2 | ubiquiting-conjugating enzyme 2 | chr2:774271-775149 FORWARD LENGTH=152 |