- Predicted Gene MLOC_79676
MLOC_79676 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_79676_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_79676_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 21.4441 | 16.1159 | 20.4988 | 14.7999 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 51.0302 | 61.2836 | 66.742 | 38.7705 |
INF1 | Young developing inflorescences (5mm) | 12.5838 | 14.7084 | 17.6873 | 9.77197 |
INF2 | Developing inflorescences (1-1.5 cm) | 3.52032 | 3.17485 | 3.50236 | 3.06689 |
ROO | Roots from the seedlings (10 cm shoot stage) | 29.9863 | 14.2956 | 12.0522 | 15.0349 |
NOD | Developing tillers at six leaf stage, 3rd internode | 87.3432 | 17.6152 | 42.9483 | 53.1039 |
CAR5 | Developing grain, bracts removed (5 DPA) | 15.4952 | 10.1416 | 13.7778 | 10.3836 |
CAR15 | Developing grain, bracts removed (15 DPA) | 2.92786 | 2.3943 | 2.89683 | 5.10198 |
CDS Structure of MLOC_79676
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_79676.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os04g37710.1 |
-1 |
3e-49 |
167 |
81/92 (88%) |
13104.m03608 protein serine hydrolase domain containing protein, expressed |
TAIR PP10 |
AT4G24380.2 |
-1 |
2e-35 |
128 |
61/96 (64%) |
CONTAINS InterPro DOMAIN/s: Serine hydrolase (InterPro:IPR005645); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT5G65400.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). | chr4:12612554-12613310 FORWARD LENGTH=171 |