MLOC_79669 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains20.65217.601722.503221.0698
LEAShoots from the seedlings (10 cm shoot stage)22.477310.04348.482611.9491
INF1Young developing inflorescences (5mm)0.8005450.4303021.305150.745076
INF2Developing inflorescences (1-1.5 cm)1.080962.14452.354322.05334
ROORoots from the seedlings (10 cm shoot stage)100.90259.638654.456282.7507
NODDeveloping tillers at six leaf stage, 3rd internode118.40582.8185344.307383.922
CAR5Developing grain, bracts removed (5 DPA)0.9631490.7642780.490890.75413
CAR15Developing grain, bracts removed (15 DPA)3.830636.29466.8677813.1655



CDS Structure of MLOC_79669






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_79669.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK370324NoneNoneNoneNone
MLOC_79669.1CUST_6745_PI427708080AvailableAvailablecontig_86247 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g59210.1 +3 8e-33 117 54/64 (84%) 13103.m06502 protein hypothetical protein
TAIR PP10None-----