- Predicted Gene MLOC_79660
MLOC_79660 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 2.08783 | 3.39929 | 3.06807 | 3.36431 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 1.82968 | 0.308881 | 0.297712 | 0.744119 |
| INF1 | Young developing inflorescences (5mm) | 11.8002 | 11.5864 | 10.4977 | 10.0795 |
| INF2 | Developing inflorescences (1-1.5 cm) | 11.9529 | 13.5128 | 9.67851 | 14.6029 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 0.31038 | 1.37618 | 1.02923 | 1.64781 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 0.214081 | 0.265023 | 0.079442 | 0.84615 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 3.42383 | 3.65246 | 3.4142 | 3.8698 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 1.13203 | 1.02143 | 1.21226 | 2.71492 |
CDS Structure of MLOC_79660
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_79660.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os03g48490.1 |
-3 |
0.0 |
1066 |
686/1165 (59%) |
13103.m05233 protein centromere protein, putative, expressed |
| TAIR PP10 |
AT4G38070.1 |
-3 |
1e-79 |
292 |
272/998 (27%) |
basic helix-loop-helix (bHLH) DNA-binding superfamily protein | chr4:17876535-17882569 FORWARD LENGTH=1513 |