MLOC_79590 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.8045370.3559230.3810940.463879
LEAShoots from the seedlings (10 cm shoot stage)2.1299810.35332.387213.81252
INF1Young developing inflorescences (5mm)0.22173600.05484770.122076
INF2Developing inflorescences (1-1.5 cm)00.08967250.2223180.174843
ROORoots from the seedlings (10 cm shoot stage)0.5108740.22209400.377638
NODDeveloping tillers at six leaf stage, 3rd internode00.0628911.075021.22477
CAR5Developing grain, bracts removed (5 DPA)27.06121.891724.809924.3334
CAR15Developing grain, bracts removed (15 DPA)12.78458.1205614.068428.2226



CDS Structure of MLOC_79590






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK374957
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK374957CUST_25936_PI427708080NoneNoneNone
MLOC_3432.1NoneAvailableNonecontig_13081 (Not mapped)
MLOC_65026.1NoneAvailableNonecontig_49648 (Mapped)
MLOC_79590.1NoneAvailableAvailablecontig_8579 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----