MLOC_79575 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains1.680320.774821.11571.09855
LEAShoots from the seedlings (10 cm shoot stage)0.3939410.8470881.39910.711712
INF1Young developing inflorescences (5mm)1.847981.916441.678041.47699
INF2Developing inflorescences (1-1.5 cm)1.95511.705231.852951.91808
ROORoots from the seedlings (10 cm shoot stage)1.981350.7511231.103321.16792
NODDeveloping tillers at six leaf stage, 3rd internode1.062431.350322.31524.25813
CAR5Developing grain, bracts removed (5 DPA)1.125451.214520.9819491.04076
CAR15Developing grain, bracts removed (15 DPA)0.2923020.234870.1614480.561297



CDS Structure of MLOC_79575






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_79575.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_79575.1NoneAvailableAvailablecontig_85734 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os06g43520.1 +3 2e-52 191 108/211 (51%) 13106.m04554 protein cytochrome P450 71D7, putative, expressed
TAIR PP10 AT5G32440.1 +3 2e-31 122 73/217 (34%) Ubiquitin system component Cue protein | chr5:12077014-12078396 FORWARD LENGTH=264