MLOC_79574 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains48.085647.418447.573847.126
LEAShoots from the seedlings (10 cm shoot stage)41.708333.723832.196629.9134
INF1Young developing inflorescences (5mm)78.039575.922270.214363.6374
INF2Developing inflorescences (1-1.5 cm)58.140662.463567.671467.3337
ROORoots from the seedlings (10 cm shoot stage)36.420449.258957.516155.8699
NODDeveloping tillers at six leaf stage, 3rd internode33.425524.544924.815674.5998
CAR5Developing grain, bracts removed (5 DPA)39.300144.391344.88141.9074
CAR15Developing grain, bracts removed (15 DPA)21.170418.316916.852644.4907



CDS Structure of MLOC_79574






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_79574.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK357765NoneNoneNoneNone
MLOC_79574.1CUST_6743_PI427708080AvailableAvailablecontig_85721 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g49230.1 -2 6e-109 318 167/174 (96%) 13103.m05330 protein acetyltransferase, GNAT family, putative, expressed
TAIR PP10 AT1G03150.1 -2 4e-99 293 150/174 (86%) Acyl-CoA N-acyltransferases (NAT) superfamily protein | chr1:756461-758441 FORWARD LENGTH=174