MLOC_79567 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.137340.11883900.144416
LEAShoots from the seedlings (10 cm shoot stage)33.663365.303958.160338.3724
INF1Young developing inflorescences (5mm)0000
INF2Developing inflorescences (1-1.5 cm)0000
ROORoots from the seedlings (10 cm shoot stage)0000
NODDeveloping tillers at six leaf stage, 3rd internode000.107750.196027
CAR5Developing grain, bracts removed (5 DPA)0000
CAR15Developing grain, bracts removed (15 DPA)00.03475640.04349360.149599



CDS Structure of MLOC_79567






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_79567.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK250700.1NoneNoneNoneNone
MLOC_79567.1CUST_6740_PI427708080AvailableAvailablecontig_85648 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g14430.1 +2 8e-170 486 251/329 (76%) 13102.m01605 protein peroxidase precursor, putative, expressed
TAIR PP10 AT5G05340.1 +2 9e-117 350 173/296 (58%) Peroxidase superfamily protein | chr5:1579142-1580819 REVERSE LENGTH=324