MLOC_79521 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.1697750.14363100.182873
LEAShoots from the seedlings (10 cm shoot stage)0000
INF1Young developing inflorescences (5mm)0000
INF2Developing inflorescences (1-1.5 cm)0000
ROORoots from the seedlings (10 cm shoot stage)0.618025000.487303
NODDeveloping tillers at six leaf stage, 3rd internode0.7977340.3912401.1755
CAR5Developing grain, bracts removed (5 DPA)0000
CAR15Developing grain, bracts removed (15 DPA)0.114784000.404442



CDS Structure of MLOC_79521






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_79521.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_79521.1CUST_10604_PI427708083AvailableAvailablecontig_8542 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os08g04340.1 -3 6e-34 121 56/77 (73%) 13108.m00411 protein plastocyanin-like domain containing protein, putative, expressed
TAIR PP10 AT3G27200.1 -3 8e-22 88 42/79 (53%) Cupredoxin superfamily protein | chr3:10043738-10044340 REVERSE LENGTH=174