MLOC_79517 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.16655500.1169140.153722
LEAShoots from the seedlings (10 cm shoot stage)0000
INF1Young developing inflorescences (5mm)00.075946600.0640121
INF2Developing inflorescences (1-1.5 cm)00.056184200.0857508
ROORoots from the seedlings (10 cm shoot stage)0000
NODDeveloping tillers at six leaf stage, 3rd internode0.2106490.1464520.04496410.465797
CAR5Developing grain, bracts removed (5 DPA)00.068075300.0807067
CAR15Developing grain, bracts removed (15 DPA)0000



CDS Structure of MLOC_79517






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_79517.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_79517.1CUST_10602_PI427708083AvailableAvailablecontig_8541 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g40550.1 +2 1e-99 307 159/218 (73%) 13103.m04385 protein kinase, pfkB family, putative, expressed
TAIR PP10 AT1G69200.1 +2 1e-51 180 104/222 (47%) | Symbols: FLN2 | fructokinase-like 2 | chr1:26016018-26018365 FORWARD LENGTH=616