- Predicted Gene MLOC_79498
MLOC_79498 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_79498_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_79498_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 171.961 | 141.735 | 143.249 | 163.884 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 174.076 | 265.023 | 332.962 | 227.121 |
INF1 | Young developing inflorescences (5mm) | 29.8143 | 36.7491 | 41.9022 | 34.7295 |
INF2 | Developing inflorescences (1-1.5 cm) | 47.3506 | 51.3991 | 55.9134 | 63.1887 |
ROO | Roots from the seedlings (10 cm shoot stage) | 760.133 | 570.605 | 441.846 | 720.762 |
NOD | Developing tillers at six leaf stage, 3rd internode | 158.148 | 259.127 | 191.156 | 768.833 |
CAR5 | Developing grain, bracts removed (5 DPA) | 131.609 | 151.499 | 124.106 | 153.558 |
CAR15 | Developing grain, bracts removed (15 DPA) | 17.4974 | 17.1982 | 18.9949 | 47.2925 |
CDS Structure of MLOC_79498
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_79498.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os02g27030.1 |
-1 |
0.0 |
645 |
306/351 (87%) |
13102.m02936 protein cysteine proteinase 1 precursor, putative, expressed |
TAIR PP10 |
AT4G39090.1 |
-1 |
1e-177 |
509 |
246/347 (71%) |
| Symbols: RD19, RD19A | Papain family cysteine protease | chr4:18215826-18217326 REVERSE LENGTH=368 |