MLOC_79489 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains10.48357.608619.315237.62475
LEAShoots from the seedlings (10 cm shoot stage)4.080683.15093.745092.74518
INF1Young developing inflorescences (5mm)13.053713.723621.804611.1873
INF2Developing inflorescences (1-1.5 cm)19.440318.632720.645518.4022
ROORoots from the seedlings (10 cm shoot stage)3.942344.919116.434644.81534
NODDeveloping tillers at six leaf stage, 3rd internode7.9933113.536313.720136.6494
CAR5Developing grain, bracts removed (5 DPA)5.400474.457244.9414.02555
CAR15Developing grain, bracts removed (15 DPA)0.5553780.7178030.841541.30479



CDS Structure of MLOC_79489






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_79489.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_79489.1CUST_17860_PI427708080AvailableAvailablecontig_85282 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os11g27430.1 -1 1e-69 253 177/326 (54%) 13111.m02628 protein NB-ARC domain containing protein
TAIR PP10None-----