MLOC_79423 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains1.938913.646673.220222.70861
LEAShoots from the seedlings (10 cm shoot stage)6.286275.705354.529154.27371
INF1Young developing inflorescences (5mm)3.365283.265513.078142.52792
INF2Developing inflorescences (1-1.5 cm)4.517264.556044.835654.58059
ROORoots from the seedlings (10 cm shoot stage)4.053995.365684.755325.34474
NODDeveloping tillers at six leaf stage, 3rd internode1.99912.588633.052727.73417
CAR5Developing grain, bracts removed (5 DPA)3.847913.691744.208923.26884
CAR15Developing grain, bracts removed (15 DPA)2.509722.299132.190034.69511



CDS Structure of MLOC_79423






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_79423.3
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK366100NoneNoneNoneNone
MLOC_79423.3CUST_18479_PI427708080AvailableAvailablecontig_83686 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g17010.1 -2 0.0 1877 983/1138 (86%) 13101.m01907 protein phospholipid-transporting ATPase, putative, expressed
TAIR PP10 AT5G04930.1 -2 0.0 1379 717/1120 (64%) | Symbols: ALA1 | aminophospholipid ATPase 1 | chr5:1445509-1449568 FORWARD LENGTH=1158