MLOC_79421 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.242280.2795250.3648540.235732
LEAShoots from the seedlings (10 cm shoot stage)0.2985560.03157370.148680.125736
INF1Young developing inflorescences (5mm)0.80981.078191.018760.491435
INF2Developing inflorescences (1-1.5 cm)1.751941.808361.505411.38955
ROORoots from the seedlings (10 cm shoot stage)0.1334790.1805030.2591120.18881
NODDeveloping tillers at six leaf stage, 3rd internode0.09430570.0850280.1615750.251969
CAR5Developing grain, bracts removed (5 DPA)0.3265080.5871860.5155450.343833
CAR15Developing grain, bracts removed (15 DPA)0.11469100.05492820.107705



CDS Structure of MLOC_79421






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_79421.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_79421.2CUST_16631_PI427708080AvailableAvailablecontig_84950 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g17000.1 +3 3e-180 558 286/487 (59%) 13101.m01906 protein expressed protein
TAIR PP10 AT5G04930.1 -2 4e-75 275 142/236 (60%) | Symbols: ALA1 | aminophospholipid ATPase 1 | chr5:1445509-1449568 FORWARD LENGTH=1158