MLOC_7936 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 0.256919 | 0.631544 | 0.43733 | 0.46917 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 49.9528 | 64.6952 | 42.7774 | 40.5146 |
| INF1 | Young developing inflorescences (5mm) | 0.187078 | 0.162459 | 0.251915 | 0.162339 |
| INF2 | Developing inflorescences (1-1.5 cm) | 0.0885966 | 0.132282 | 0.12974 | 0.130215 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 0.331099 | 0.34699 | 0.381434 | 0.381904 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 2.33653 | 2.29254 | 1.72877 | 5.8111 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 0.267299 | 0.311311 | 0.35031 | 0.293292 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 0.0631878 | 0.0998907 | 0.128481 | 0.213441 |
CDS Structure of MLOC_7936
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_7936.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os11g32650.1 |
+2 |
0.0 |
706 |
360/388 (93%) |
13111.m03183 protein chalcone synthase, putative, expressed |
| TAIR PP10 |
AT5G13930.1 |
+2 |
0.0 |
637 |
319/387 (82%) |
| Symbols: CHS, TT4, ATCHS | Chalcone and stilbene synthase family protein | chr5:4488762-4490035 FORWARD LENGTH=395 |
