MLOC_79344 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains7.890044.4259410.68930
LEAShoots from the seedlings (10 cm shoot stage)0.8955882.047381.413440
INF1Young developing inflorescences (5mm)000.5683650
INF2Developing inflorescences (1-1.5 cm)000.5106250
ROORoots from the seedlings (10 cm shoot stage)9.485922.464884.724160
NODDeveloping tillers at six leaf stage, 3rd internode0.2000330.5209580.144230
CAR5Developing grain, bracts removed (5 DPA)0.259050.4752720.7841640
CAR15Developing grain, bracts removed (15 DPA)0.2186850.4850970.9604390



CDS Structure of MLOC_79344






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK362753
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK362753CUST_20600_PI427708080NoneNoneNone
MLOC_11635.1NoneAvailableAvailablecontig_1561505 (Mapped)
MLOC_14893.1NoneAvailableNonecontig_156935 (Mapped)
MLOC_35571.1NoneAvailableNonecontig_250181 (Not mapped)
MLOC_42959.1NoneAvailableNonecontig_2669278 (Not mapped)
MLOC_49015.1NoneAvailableNonecontig_333840 (Mapped)
MLOC_79344.1NoneAvailableNonecontig_845354 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----