MLOC_79331 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains56.936847.533247.138651.0467
LEAShoots from the seedlings (10 cm shoot stage)46.53340.107140.723735.608
INF1Young developing inflorescences (5mm)45.532257.867748.112245.4426
INF2Developing inflorescences (1-1.5 cm)36.626542.855139.634845.9816
ROORoots from the seedlings (10 cm shoot stage)90.855380.941277.351195.9931
NODDeveloping tillers at six leaf stage, 3rd internode40.940848.43632.0674139.243
CAR5Developing grain, bracts removed (5 DPA)134.203130.068127.398133.341
CAR15Developing grain, bracts removed (15 DPA)75.923468.202661.9245172.319



CDS Structure of MLOC_79331






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_79331.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK356755NoneNoneNoneNone
MLOC_79331.1CUST_6732_PI427708080AvailableAvailablecontig_84476 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os04g58110.1 +2 0.0 917 475/514 (92%) 13104.m06095 protein pyruvate kinase, putative, expressed
TAIR PP10 AT5G08570.1 +2 0.0 838 414/491 (84%) Pyruvate kinase family protein | chr5:2778433-2780300 FORWARD LENGTH=510