- Predicted Gene MLOC_79317
MLOC_79317 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_79317_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_79317_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 58.9626 | 53.6123 | 50.8632 | 55.3558 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 33.8254 | 14.3879 | 13.4431 | 16.1509 |
INF1 | Young developing inflorescences (5mm) | 28.1635 | 51.0514 | 36.3206 | 36.7246 |
INF2 | Developing inflorescences (1-1.5 cm) | 35.8412 | 32.5154 | 29.6264 | 38.6802 |
ROO | Roots from the seedlings (10 cm shoot stage) | 92.0223 | 65.7454 | 103.544 | 83.1493 |
NOD | Developing tillers at six leaf stage, 3rd internode | 51.5716 | 37.8409 | 43.3116 | 99.2487 |
CAR5 | Developing grain, bracts removed (5 DPA) | 37.8626 | 39.6703 | 39.5161 | 41.6681 |
CAR15 | Developing grain, bracts removed (15 DPA) | 5.6828 | 3.17927 | 4.62803 | 11.1953 |
CDS Structure of MLOC_79317
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_79317.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os06g46030.1 |
+2 |
2e-48 |
164 |
73/80 (91%) |
13106.m04861 protein DUF640 domain containing protein, putative, expressed |
TAIR PP10 |
AT3G23290.2 |
+2 |
7e-41 |
140 |
61/69 (88%) |
| Symbols: LSH4 | Protein of unknown function (DUF640) | chr3:8326958-8328010 FORWARD LENGTH=195 |