- Predicted Gene MLOC_79305
MLOC_79305 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_79305_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_79305_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 7.28911 | 4.64451 | 5.01879 | 5.58306 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 7.55758 | 1.49807 | 3.18044 | 3.30593 |
INF1 | Young developing inflorescences (5mm) | 0.993514 | 0.972857 | 1.25874 | 1.01487 |
INF2 | Developing inflorescences (1-1.5 cm) | 1.40839 | 2.15899 | 2.30587 | 2.47467 |
ROO | Roots from the seedlings (10 cm shoot stage) | 8.44769 | 5.41955 | 2.99438 | 6.39514 |
NOD | Developing tillers at six leaf stage, 3rd internode | 10.1505 | 19.4717 | 5.9207 | 48.2132 |
CAR5 | Developing grain, bracts removed (5 DPA) | 11.7047 | 11.9694 | 9.91792 | 12.6871 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0.588149 | 0.364127 | 0.817125 | 1.53447 |
CDS Structure of MLOC_79305
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_79305.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os11g31590.1 |
+2 |
2e-131 |
392 |
206/268 (77%) |
13111.m03062 protein armadillo, putative, expressed |
TAIR PP10 |
AT5G50900.1 |
+2 |
3e-44 |
163 |
109/267 (41%) |
ARM repeat superfamily protein | chr5:20705051-20706718 REVERSE LENGTH=555 |