MLOC_79210 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.5750520.7690061.065980.775521
LEAShoots from the seedlings (10 cm shoot stage)3.227931.163521.750471.71991
INF1Young developing inflorescences (5mm)0000
INF2Developing inflorescences (1-1.5 cm)0000
ROORoots from the seedlings (10 cm shoot stage)11.38674.93959.547687.21753
NODDeveloping tillers at six leaf stage, 3rd internode2.765474.079142.1464310.8956
CAR5Developing grain, bracts removed (5 DPA)6.585767.200296.49226.77275
CAR15Developing grain, bracts removed (15 DPA)0.5933850.7712430.7844351.7574



CDS Structure of MLOC_79210






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_79210.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_79210.1CUST_13364_PI427708083AvailableAvailablecontig_83904 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g52830.1 -1 1e-37 141 65/82 (79%) 13102.m06022 protein lipase, putative, expressed
TAIR PP10 AT5G42930.1 -1 2e-22 97 45/83 (54%) alpha/beta-Hydrolases superfamily protein | chr5:17210738-17214152 REVERSE LENGTH=467