MLOC_79191 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0000
LEAShoots from the seedlings (10 cm shoot stage)0000
INF1Young developing inflorescences (5mm)0000
INF2Developing inflorescences (1-1.5 cm)0000
ROORoots from the seedlings (10 cm shoot stage)0000
NODDeveloping tillers at six leaf stage, 3rd internode0000
CAR5Developing grain, bracts removed (5 DPA)0.3756910.7113990.5565270.376645
CAR15Developing grain, bracts removed (15 DPA)0000



CDS Structure of MLOC_79191






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_79191.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_79191.1CUST_16612_PI427708080AvailableAvailablecontig_8383 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os12g29370.1 -2 5e-47 169 84/155 (54%) 13112.m02981 protein ZmEBE-1 protein, putative
TAIR PP10 AT3G48230.1 -2 5e-15 77 57/160 (36%) Protein of Unknown Function (DUF239) | chr3:17855715-17858019 FORWARD LENGTH=373