MLOC_79176 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains1.624590.8729520.5887630.95118
LEAShoots from the seedlings (10 cm shoot stage)11.398920.119837.997418.1136
INF1Young developing inflorescences (5mm)0000
INF2Developing inflorescences (1-1.5 cm)0000
ROORoots from the seedlings (10 cm shoot stage)0.9134441.876421.108011.75084
NODDeveloping tillers at six leaf stage, 3rd internode0.09335390.1159020.07173470.276121
CAR5Developing grain, bracts removed (5 DPA)0000
CAR15Developing grain, bracts removed (15 DPA)0.2390120.7058440.2937881.05163



CDS Structure of MLOC_79176






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_79176.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK361691NoneNoneNoneNone
MLOC_79176.1CUST_6727_PI427708080AvailableAvailablecontig_83764 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os07g48010.1 -3 2e-139 405 210/295 (71%) 13107.m05129 protein peroxidase precursor, putative, expressed
TAIR PP10 AT5G05340.1 -3 3e-105 317 173/293 (59%) Peroxidase superfamily protein | chr5:1579142-1580819 REVERSE LENGTH=324