MLOC_79085 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains37.007145.216649.157630.4798
LEAShoots from the seedlings (10 cm shoot stage)17.050714.11137.713958.12672
INF1Young developing inflorescences (5mm)25.71423.53520.712115.2418
INF2Developing inflorescences (1-1.5 cm)15.748516.861711.949813.4403
ROORoots from the seedlings (10 cm shoot stage)26.379522.612726.301417.8089
NODDeveloping tillers at six leaf stage, 3rd internode16.54865.059459.2628312.3401
CAR5Developing grain, bracts removed (5 DPA)27.005225.754830.366420.6218
CAR15Developing grain, bracts removed (15 DPA)25.781523.096724.809947.8975



CDS Structure of MLOC_79085






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_79085.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_79085.1NoneAvailableAvailablecontig_83303 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g41419.1 +2 2e-34 137 106/136 (78%) 13103.m04459 protein serpin domain containing protein, putative, expressed
TAIR PP10None-----