MLOC_79070 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains5.574487.771697.072137.08356
LEAShoots from the seedlings (10 cm shoot stage)8.27158.2058.36347.23462
INF1Young developing inflorescences (5mm)15.690413.383914.407711.8928
INF2Developing inflorescences (1-1.5 cm)9.278659.319829.151739.86508
ROORoots from the seedlings (10 cm shoot stage)1.262093.042842.62143.36852
NODDeveloping tillers at six leaf stage, 3rd internode9.91447.583716.1295625.6275
CAR5Developing grain, bracts removed (5 DPA)8.037677.379868.997437.57823
CAR15Developing grain, bracts removed (15 DPA)1.785051.805391.40053.82137



CDS Structure of MLOC_79070






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_79070.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK358441NoneNoneNoneNone
MLOC_79070.2CUST_6720_PI427708080AvailableAvailablecontig_83223 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g20300.2 -3 0.0 960 480/606 (79%) 13103.m02429 protein glucose-6-phosphate 1-dehydrogenase, chloroplast precursor, putative, expressed
TAIR PP10 AT1G09420.1 -3 0.0 676 330/474 (70%) | Symbols: G6PD4 | glucose-6-phosphate dehydrogenase 4 | chr1:3038640-3041715 REVERSE LENGTH=625