MLOC_7906 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 15.512 | 13.2325 | 13.5103 | 13.1727 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 10.1971 | 12.6177 | 12.0556 | 9.13388 |
| INF1 | Young developing inflorescences (5mm) | 14.0522 | 13.7315 | 13.1128 | 10.9792 |
| INF2 | Developing inflorescences (1-1.5 cm) | 14.817 | 13.1249 | 11.9293 | 14.3 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 16.071 | 15.1699 | 14.8737 | 16.903 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 9.38192 | 7.17809 | 8.37082 | 22.0748 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 9.48004 | 9.40784 | 11.2918 | 9.46956 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 2.05428 | 2.36713 | 1.8919 | 4.7596 |
CDS Structure of MLOC_7906
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_7906.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os04g39450.1 |
+1 |
1e-89 |
277 |
159/220 (72%) |
13104.m03825 protein expressed protein |
| TAIR PP10 |
AT3G57280.1 |
+1 |
5e-36 |
134 |
80/171 (47%) |
Transmembrane proteins 14C | chr3:21193960-21195547 FORWARD LENGTH=226 |
