- Predicted Gene MLOC_79050
MLOC_79050 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_79050_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_79050_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 8.86158 | 4.41539 | 7.00216 | 5.58574 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 95.4296 | 54.1833 | 73.4739 | 56.2961 |
INF1 | Young developing inflorescences (5mm) | 0.053305 | 0 | 0.151881 | 0.0886223 |
INF2 | Developing inflorescences (1-1.5 cm) | 0.611105 | 1.78267 | 1.66914 | 1.20161 |
ROO | Roots from the seedlings (10 cm shoot stage) | 0.651838 | 4.66839 | 0.994534 | 3.56257 |
NOD | Developing tillers at six leaf stage, 3rd internode | 4.40774 | 10.5197 | 0.816683 | 21.52 |
CAR5 | Developing grain, bracts removed (5 DPA) | 0.325199 | 0.798698 | 0.536618 | 0.395563 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0.117689 | 0 | 0.667758 | 0.312485 |
CDS Structure of MLOC_79050
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_79050.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os11g24070.1 |
-2 |
4e-23 |
95 |
51/91 (56%) |
13111.m02293 protein LTPL10 - Protease inhibitor/seed storage/LTP family protein precursor, expressed |
TAIR PP10 |
AT5G59310.1 |
-2 |
7e-25 |
99 |
49/88 (56%) |
| Symbols: LTP4 | lipid transfer protein 4 | chr5:23925296-23925772 REVERSE LENGTH=112 |