- Predicted Gene MLOC_79046
MLOC_79046 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 3.783 | 2.34027 | 2.12227 | 2.64276 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 9.89504 | 15.8704 | 17.9437 | 12.1647 |
| INF1 | Young developing inflorescences (5mm) | 1.33259 | 1.59891 | 1.67866 | 1.28658 |
| INF2 | Developing inflorescences (1-1.5 cm) | 0.771683 | 0.879891 | 1.15888 | 0.977641 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 2.05615 | 1.06257 | 1.36933 | 1.48413 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 9.56606 | 11.8687 | 11.8712 | 36.6563 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 3.7474 | 3.66914 | 3.82858 | 3.58296 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 0.60749 | 0.60596 | 1.15496 | 1.65421 |
CDS Structure of MLOC_79046
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_79046.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os10g25030.1 |
-1 |
2e-101 |
307 |
164/205 (80%) |
13110.m02104 protein red chlorophyll catabolite reductase, putative, expressed |
| TAIR PP10 |
AT4G37000.1 |
-1 |
9e-51 |
175 |
98/206 (48%) |
| Symbols: ACD2, ATRCCR | accelerated cell death 2 (ACD2) | chr4:17442627-17443762 FORWARD LENGTH=319 |