- Predicted Gene MLOC_79028
MLOC_79028 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 17.6944 | 10.7604 | 11.2213 | 12.2603 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 11.9175 | 5.82316 | 9.19462 | 7.17884 |
| INF1 | Young developing inflorescences (5mm) | 25.2966 | 29.189 | 32.9949 | 25.8858 |
| INF2 | Developing inflorescences (1-1.5 cm) | 31.8941 | 25.4815 | 30.7918 | 33.0758 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 25.1343 | 17.103 | 19.0254 | 19.9058 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 11.3019 | 19.5495 | 26.2071 | 59.1191 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 8.49084 | 9.07233 | 7.63703 | 8.52155 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 5.00819 | 4.62804 | 5.69199 | 12.7227 |
CDS Structure of MLOC_79028
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_79028.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os01g06280.2 |
+3 |
0.0 |
1016 |
617/915 (67%) |
13101.m00616 protein TKL_IRAK_CrRLK1L-1.4 - The CrRLK1L-1 subfamily has homology to the CrRLK1L homolog, expressed |
| TAIR PP10 |
AT3G46290.1 |
+3 |
0.0 |
570 |
365/896 (41%) |
| Symbols: HERK1 | hercules receptor kinase 1 | chr3:17013009-17015501 FORWARD LENGTH=830 |