MLOC_79021 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains4.3291618.322111.64230
LEAShoots from the seedlings (10 cm shoot stage)28.413529.393823.54020
INF1Young developing inflorescences (5mm)38.991532.640639.58990
INF2Developing inflorescences (1-1.5 cm)58.947440.531851.52810
ROORoots from the seedlings (10 cm shoot stage)12.679127.830529.44850
NODDeveloping tillers at six leaf stage, 3rd internode18.25144.729585.407760
CAR5Developing grain, bracts removed (5 DPA)17.985616.795815.00420
CAR15Developing grain, bracts removed (15 DPA)4.848565.422355.776550



CDS Structure of MLOC_79021






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK369867
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK369867CUST_25385_PI427708080NoneNoneNone
MLOC_41377.1NoneAvailableNonecontig_2585918 (Not mapped)
MLOC_48483.1NoneAvailableNonecontig_324459 (Not mapped)
MLOC_49171.1NoneAvailableNonecontig_336967 (Not mapped)
MLOC_69612.1NoneAvailableAvailablecontig_56694 (Mapped)
MLOC_79021.1NoneAvailableNonecontig_8302 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----