- Predicted Gene MLOC_78997
MLOC_78997 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_78997_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_78997_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 0.173924 | 0.21875 | 0 | 0.15982 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 9.54325 | 8.2324 | 10.2778 | 7.61177 |
INF1 | Young developing inflorescences (5mm) | 0 | 0.0637834 | 0 | 0.0651384 |
INF2 | Developing inflorescences (1-1.5 cm) | 0 | 0 | 0 | 0 |
ROO | Roots from the seedlings (10 cm shoot stage) | 0 | 0 | 0 | 0.353841 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0.319668 | 0.389491 | 0.483171 | 1.06329 |
CAR5 | Developing grain, bracts removed (5 DPA) | 0.0698503 | 0.196495 | 0.0662277 | 0.120784 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0.0485923 | 0 | 0 | 0.170843 |
CDS Structure of MLOC_78997
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_78997.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os07g08160.1 |
+1 |
1e-35 |
129 |
87/115 (76%) |
13107.m00805 protein early light-induced protein, chloroplast precursor, putative, expressed |
TAIR PP10 |
AT3G22840.1 |
+1 |
1e-22 |
94 |
64/113 (57%) |
| Symbols: ELIP1, ELIP | Chlorophyll A-B binding family protein | chr3:8084628-8085445 REVERSE LENGTH=195 |