- Predicted Gene MLOC_78975
MLOC_78975 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 11.8845 | 9.37499 | 10.8566 | 9.0634 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 6.58687 | 9.81042 | 14.7652 | 6.89325 |
| INF1 | Young developing inflorescences (5mm) | 12.8895 | 15.7493 | 15.6978 | 11.9608 |
| INF2 | Developing inflorescences (1-1.5 cm) | 20.6636 | 20.4998 | 23.8288 | 22.0052 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 14.9312 | 13.3873 | 9.99967 | 11.7516 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 7.06749 | 10.0456 | 16.6706 | 24.9358 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 13.61 | 15.4622 | 13.498 | 12.7989 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 8.97874 | 8.9132 | 8.27869 | 19.8834 |
CDS Structure of MLOC_78975
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_78975.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os05g01490.1 |
+2 |
5e-25 |
102 |
50/65 (77%) |
13105.m00083 protein ras-related protein, putative |
| TAIR PP10 |
AT3G11730.1 |
+2 |
2e-24 |
100 |
47/67 (70%) |
| Symbols: ATFP8, ATRABD1, RABD1 | Ras-related small GTP-binding family protein | chr3:3709490-3711397 REVERSE LENGTH=205 |