MLOC_78928 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains3.024362.71175.194610
LEAShoots from the seedlings (10 cm shoot stage)1.311521.560980.9961020
INF1Young developing inflorescences (5mm)4.697553.750855.736840
INF2Developing inflorescences (1-1.5 cm)3.004254.475832.640820
ROORoots from the seedlings (10 cm shoot stage)3.251792.319051.390130
NODDeveloping tillers at six leaf stage, 3rd internode0.9940731.128050.886980
CAR5Developing grain, bracts removed (5 DPA)3.905535.837146.568120
CAR15Developing grain, bracts removed (15 DPA)2.570032.147991.90490



CDS Structure of MLOC_78928






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK252987.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK252987.1CUST_19220_PI427708080NoneNoneNone
MLOC_2918.1NoneAvailableNonecontig_126150 (Mapped)
MLOC_41485.1NoneAvailableNonecontig_2590664 (Not mapped)
MLOC_5853.2NoneAvailableAvailablecontig_136790 (Mapped)
MLOC_78928.1NoneAvailableNonecontig_82534 (Mapped)
MLOC_9607.1NoneAvailableNonecontig_153818 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----