MLOC_78915 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains41.622327.478930.455233.6178
LEAShoots from the seedlings (10 cm shoot stage)9.0625914.331526.178914.6159
INF1Young developing inflorescences (5mm)1.617852.036511.295221.57209
INF2Developing inflorescences (1-1.5 cm)2.688952.551472.911423.23926
ROORoots from the seedlings (10 cm shoot stage)64.459648.170457.556165.7145
NODDeveloping tillers at six leaf stage, 3rd internode14.988915.208719.86449.8302
CAR5Developing grain, bracts removed (5 DPA)4.396074.257724.574694.84423
CAR15Developing grain, bracts removed (15 DPA)1.794532.495022.651676.21156



CDS Structure of MLOC_78915






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_78915.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK376180NoneNoneNoneNone
MLOC_78915.2CUST_6714_PI427708080AvailableAvailablecontig_82490 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g51210.1 +3 5e-133 385 191/218 (88%) 13101.m05338 protein uncharacterized protein PA4923, putative, expressed
TAIR PP10 AT5G11950.2 +3 5e-97 292 141/199 (71%) Putative lysine decarboxylase family protein | chr5:3855072-3856815 FORWARD LENGTH=216