- Predicted Gene MLOC_78915
MLOC_78915 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_78915_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 41.6223 | 27.4789 | 30.4552 | 33.6178 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 9.06259 | 14.3315 | 26.1789 | 14.6159 |
INF1 | Young developing inflorescences (5mm) | 1.61785 | 2.03651 | 1.29522 | 1.57209 |
INF2 | Developing inflorescences (1-1.5 cm) | 2.68895 | 2.55147 | 2.91142 | 3.23926 |
ROO | Roots from the seedlings (10 cm shoot stage) | 64.4596 | 48.1704 | 57.5561 | 65.7145 |
NOD | Developing tillers at six leaf stage, 3rd internode | 14.9889 | 15.2087 | 19.864 | 49.8302 |
CAR5 | Developing grain, bracts removed (5 DPA) | 4.39607 | 4.25772 | 4.57469 | 4.84423 |
CAR15 | Developing grain, bracts removed (15 DPA) | 1.79453 | 2.49502 | 2.65167 | 6.21156 |
CDS Structure of MLOC_78915
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_78915.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os01g51210.1 |
+3 |
5e-133 |
385 |
191/218 (88%) |
13101.m05338 protein uncharacterized protein PA4923, putative, expressed |
TAIR PP10 |
AT5G11950.2 |
+3 |
5e-97 |
292 |
141/199 (71%) |
Putative lysine decarboxylase family protein | chr5:3855072-3856815 FORWARD LENGTH=216 |